DISSECT

Overview

Dissect is a transcriptome-to-genome alignment tool, which can identify and characterize transcriptomic events such as duplications, inversions, rearrangements and fusions. Dissect is suitable for whole transcriptome structural variation discovery problems involving sufficiently long reads or accurately assembled contigs.

Dissect: detection and characterization of novel structural alterations in transcribed sequences

Yorukoglu D, Hach F, Swanson L, Collins CC, Birol I, Sahinalp SC

Bioinformatics. 2012 Jun 15;28(12):i179-87
Presented at ISMB’12 (20th Annual International Conference on Intelligent Systems for Molecular Biology), Long Beach, USA, July 19-23 2012
Won Ian Lawson Van Toch Memorial Award for Outstanding Student Paper
Journal link | PubMed ID: 22689759